Training eSupport System
  • Log In
    • Log in with UmbrellaID
    • Log in with Helmholtz AAI
    • Login
  • About
  • Events
  • Materials
  • Workflows
  • Collections
  • Learning paths
  • Spaces
  • Directory
    • Providers

PaN-Training makes use of some necessary cookies to provide its core functionality.

See our Privacy Policy for more information.

You can modify your cookie preferences at any time here, or from the link in the footer.

Allow necessary cookies
  1. Home
  2. Materials

Filter

  • Sort

  • Filter Clear filters

    • Date added
    • In the last 24 hours
    • In the last 1 week
    • In the last 1 month
    • Scientific topic
    • FAIR data2
    • Findable, accessible, interoperable, reusable data2
    • Pipelines2
    • Software integration2
    • Tool integration2
    • Tool interoperability2
    • Workflows2
    • Bayesian methods1
    • Bioinformatics1
    • Biostatistics1
    • Cloud computing1
    • Comparative transcriptomics1
    • Computer science1
    • Data management1
    • Data rendering1
    • Data visualisation1
    • Descriptive statistics1
    • Gaussian processes1
    • HPC1
    • High performance computing1
    • High-performance computing1
    • Inferential statistics1
    • Informatics1
    • Information management1
    • Information science1
    • Knowledge management1
    • Markov processes1
    • Metadata management1
    • MicroRNA sequencing1
    • Multivariate statistics1
    • Open science1
    • Probabilistic graphical model1
    • Probability1
    • RNA sequencing1
    • RNA-Seq1
    • RNA-Seq analysis1
    • Research data management (RDM)1
    • Small RNA sequencing1
    • Small RNA-Seq1
    • Small-Seq1
    • Source control1
    • Statistics1
    • Statistics and probability1
    • Transcriptome1
    • Transcriptome profiling1
    • Transcriptomics1
    • Version control1
    • WTSS1
    • Whole transcriptome shotgun sequencing1
    • miRNA-seq1
    • Show N_FILTERS more
    • Tool
    • BioContainers1
    • Bioconductor1
    • DESeq1
    • Enrichr1
    • FastQC1
    • GSEA1
    • MultiQC1
    • Nextflow1
    • QualiMap1
    • RStudio1
    • SAMtools1
    • STAR1
    • Salmon1
    • Trim Galore1
    • UCSC Genome Browser1
    • biomaRt1
    • ggplot21
    • nf-core-rnaseq1
    • Show N_FILTERS more
    • Content provider
    • Elixir TeSS3
    • Paul Scherrer Institute (PSI)1
    • Show N_FILTERS more
    • Keyword
    • Workflows2
    • Automated testing1
    • BIoinformatics1
    • Computing1
    • Health Services1
    • Materials Science1
    • Nextflow1
    • Open Access1
    • Open Science1
    • Open Source Software1
    • Open source code1
    • Python1
    • Python for Data Analysis1
    • R Programming1
    • RAP1
    • RNA-seq1
    • RStudio1
    • Reproducibility1
    • Reproducible Analytical Pipeline1
    • Reproducible Environment1
    • Reproducible Research1
    • Reproducible Science1
    • SPARQL1
    • SimPy1
    • Simulation1
    • Simulations1
    • Transcriptomics1
    • discrete-event simulation1
    • fuseki1
    • login required1
    • nf-co.re1
    • reproduce1
    • reproducible research1
    • simmer1
    • Show N_FILTERS more
    • Difficulty level
    • Intermediate2
    • Beginner1
    • Not specified1
    • Show N_FILTERS more
    • Licence
    • MIT License
    • Creative Commons Attribution 4.0 International47
    • License Not Specified26
    • Creative Commons Attribution Share Alike 4.0 International17
    • Creative Commons Attribution Non Commercial Share Alike 4.0 International6
    • Creative Commons Attribution Non Commercial 4.0 International2
    • Creative Commons Zero v1.0 Universal1
    • Show N_FILTERS more
    • Target audience
    • Analysts1
    • Bioinformaticians1
    • Biologists interested in learning about RNA-seq1
    • Chemists1
    • Data Managers1
    • Materials scientists1
    • Physicists1
    • Postgraduate students1
    • Research Software Engineers1
    • Researchers1
    • Show N_FILTERS more
    • Author
    • Aliaksandr V. Yakutovich1
    • Amy Heather1
    • Andres Ortega-Guerrero1
    • Anna Delgado Tejedor1
    • Carlo A. Pignedoli1
    • Christopher J. Sewell1
    • Daniel Hollas1
    • David Palecek1
    • Deborah Prezzi1
    • Dou Du1
    • Edan Bainglass1
    • Elisa Molinari1
    • Fabian Andrade Lozano1
    • Giovanni Pizzi1
    • Ifeanyi J. Onuorah1
    • Iurii Timrov1
    • Julia Ponomarenko1
    • Junfeng Qiao1
    • Jusong Yu1
    • Lorenzo Bastonero1
    • Luca Cozzuto1
    • Marnik Bercx1
    • Michael A. Hernández-Bertrán1
    • Miki Bonacci1
    • Nataliya Paulish1
    • Nicola Marzari1
    • Peter N. O. Gillespie1
    • Pietro Bonfà1
    • Roberto De Renzi1
    • Sarah Bonnin1
    • Sebastiaan P. Huber1
    • Timo Reents1
    • Toni Hermoso Pulido1
    • Xing Wang1
    • Show N_FILTERS more
    • Contributor
    • Alison Harper1
    • Antonia Taiani1
    • Cymon Cox1
    • Fatemeh Alidoost1
    • Nav Mustafee1
    • Rob Challen1
    • Tom Monks1
    • Tom Slater1
    • Show N_FILTERS more
    • Resource type
    • Course materials2
    • Training materials2
    • Tutorial2
    • Book1
    • Coding1
    • Computer Science1
    • Computer Software1
    • Data Science1
    • Documentation1
    • E-Learning1
    • E-learning1
    • Education1
    • Educational Resource1
    • FREE online course1
    • How-to guide1
    • Jupyter notebook1
    • Online material1
    • Open educational resource1
    • Programming1
    • case studies1
    • course materials1
    • e-Learning1
    • e-learning1
    • educational materials1
    • examples1
    • handbook1
    • hands-on tutorial1
    • knowledgebase1
    • online course1
    • online modules1
    • online tutorial1
    • service1
    • tutorial1
    • tutorials1
    • workflow1
    • Show N_FILTERS more
    • Collection
    • PaNOSC Node Service Collection1
    • Show N_FILTERS more
    • Status
    • Active
    • Show N_FILTERS more
  • Only show materials from current space
  • Show disabled materials
  • Show materials with broken links
  • Show archived materials

Training materials

  • Subscribe via email

Email Subscription

Register training material

Licence: MIT License

and Status: Active

and Across all spaces: true

4 materials found
  • Course materials, Training materials

    RNA-seq Bioinformatics Course

    • beginner
    RNA-Seq Transcriptomics Bioinformatics FAIR data Workflows BIoinformatics Nextflow RNA-seq RStudio Transcriptomics …
  • Book, Coding, Computer Science, Computer Software, Course materials, Data Science, Documentation, E-Learning, E-learning, Education, Educational Resource, FREE online course, How-to guide, Jupyter notebook, Online material, Open educational resource, Programming, Training materials, Tutorial, case studies, course materials, e-Learning, e-learning, educational materials, examples, handbook, hands-on tutorial, knowledgebase, online course, online modules, online tutorial, tutorial, tutorials, workflow

    DES RAP Book: Reproducible Discrete-Event Simulation in Python and R

    •• intermediate
    Computer science Data visualisation Data management FAIR data Informatics Open science Statistics and probability Version control Workflows Automated testing …
  • Tutorial

    EMO-BON Metagenomics: From Backend Integration to Frontend Processing

    •• intermediate
    Python SPARQL fuseki
  • service

    AiiDAlab Quantum ESPRESSO app

    Materials Science Computing Simulations Workflows login required
Training eSupport System
pan-training@hzdr.de
Imprint
Contribute
About PaN-Training
Browse Spaces
Funding & acknowledgements
Privacy
Cookie preferences
Version: 1.5.1
Source code
API documentation

The training portal for the photon & neutron community is supported through the European Union's Horizon 2020 research and innovation programme, under grant agreement 857641, 823852, the Horizon Europe Framework under grant agreement 101129751, and the consortium DAPHNE4NFDI in the context of the work of the NFDI e.V. under the DFG - project number 460248799.